Publications

  1. A. Mertiri, H. Altug, M. K. Hong, P. Mehta, J. Mertz, L.D. Ziegler and S. Erramilli “Ptichfork Bifurcation and Zharov splitting in Nonlinear Mid-infrared Photothermal Spectroscopy” (2014) ACS Photonics 1, 696-702.
  1. J. T. Shattuck, J. R Schneck, L. R. Chieffo, S. Erramilli, L. D. Ziegler “Dispersed Three-Pulse Infrared Photon Echoes of Nitrous Oxide in Water and Octanol” (2013) Journal of Physical Chemistry B, 117: 15774-15785. doi: 10.1021/jp4065533.
  2. Mertiri, H. Altug, M. K. Hong, P. Mehta, J. Mertz, L.D. Ziegler and S. Erramilli “Ptichfork Bifurcation and Zharov splitting in Nonlinear Mid-infrared Photothermal Spectroscopy”. arXiv:1310.0123 (2013, submitted, under review).
  1. C. Maedler, D. Kim, R. A. Spanjaard, M. Hong, S. Errramilli, P. Mohanty “Detection of melanoma biomarker TROY using silicon nanowire field-effect transistors” arXiv: 1312.7532 (2013)
  1. A. E. Cetin, A. Mertiri, M. Huang, S. Erramilli and H. Altug “Thermal Tuning of Surface Plasmon Polaritons using Liquid Crystals” (2103) Advanced Optical Materials 1, 915-920.
  1. R. Adato, A. Artar, S. Erramilli and H. Altug “Engineering Absorption Enhancement and Induced Transparency in Coupled Molecular and Plasmonic Resonator Systems” (2013) Nanoletters 13, 2584-2591.
  1. Carsten Mädler, Shyamsunder Erramilli, L. J. House, M. K. Hong, and Pritiraj Mohanty, “Tunable nanowire “Wheatstone bridge for improved sensitivity in molecular recognition” Applied Physics Letters 102, 043112 (2013).
  1. J. R. Schneck, E. Dimakis, J. Woodward, S. Erramilli, T. D. Moustakas,   and L. D. Ziegler “Temperature dependent photon echoes of a GaN thin film” Applied Physics Letters, 101, 142102 (2012).
  1. Arif E. Çetin, Ahmet A. Yanik, Alket Mërtiri, Shyamsunder Erramilli,Özgür E. Müstecaploglu, and Hatice Altug “Field-effect active plasmonics for ultracompact electro-optic switching” Applied Physics Letters, 101, 12113 (2012)
  1. A. Mertiri, T. Jeys, V. Liberman, M. K. Hong, J. Mertz, H. Altug and S. Erramilli “Mid-infrared photothermal heterodyne spectroscopy in a liquid crystal using a quantum cascade laser”. (2012) Applied Physics Letters, 101, 044101.
  1. E. R. Pinnick, S. Erramilli and F. Wang “Predicting the melting temperature of ice-Ih with only electronic structure information as input”. (2012) J. Chem. Phys. 137, 014510.
  1. V. Liberman, R. Adato, T. H. Jeys, B. G. Saar, S. Erramilli and Hatice Altug “Rational design and optimization of plasmonic nanoarrays for surface enhanced infrared spectroscopy”. (2012) Optics Express 20, 11953-11966.
  1. M. K. Hong and S. Erramilli “A dynamic role for water in biological systems” (2012) Journal of Biological Physics 38, 1-2. doi: 10.1007/s10867-011-9256-2
  1. Lieberman, R. Adato, A. Mertiri, A. A. Yanik, K. Chen, T. H. Jeys, S. Erramilli and H. Altug “Angle- and polarization- dependent collective excitation of plasmonic nanoarrays for surface enhanced infrared spectroscopy” (2011) Optics Express 19, 11202-11212.
  1. Chen, X, Wang, M. K. Hong, C. L. Rosenberg, B. M. Reinhard, S. Erramilli and P. Mohanty (2010) “Nanowire detection of Breast Cancer Biomarker” Applied Physics Letters 97, 233702-233705.
  2. R. Pinnick, S. Erramilli, F. Wang (2010) “Computational investigation of lipid hydration water of L-alpha 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine at three hydration levels” Molecular Physics 108, 2027-2036.
  3. R. Pinnick, S. Erramilli, F. Wang (2010) “The potential of mean force of nitrous oxide in a 1,2-dimyristoylphosphatidylcholine lipid bilayer” Chemical Physics Letters 489, 96-98.
  4. Adato, A. A. Yanik, J. L. Amsden, D. L. Kaplan, F. Omenetto, M. K Hong, S. Erramilli and H. Altug (2009) “Ultrasensitive vibrational spectroscopy of protein monolayers with plasmonic nanoantenna arrays” Proc. Natl. Acad. Sci 106, 19227-19233.
  5. Yanik. R. Adato, S. Erramilli, H. Altug (2009) “Hybridized nanocavities as single-polarized nanoantennas” Optics Express, 17, 20900-20910 .
  1. P. Celli, B. S. Turner, N. H. Afdhal, S. Keates, I. Ghiran, C. P Kelly, R. H. Ewoldt, G. H. McKinley, P. T. C. So, S. Erramilli, R. Bansil (2009) “Helicobacter pylori moves through mucus by reducing mucin viscoelasticity” Proc. Natl. Acad. Sci 106, 14321-14326.
  1. Stefan-Wenzler, T. Dunn, S. Erramilli, P. Mohanty (2009) “Nanoelectromechanical system-integrated detector with silicon nanomechanical resonator and silicon nanochannel field effect transistor” J. Appl. Physics 105, 094308.
  1. Erramilli (2009) “Solitons, From Below”, Journal of Biological Physics 35, 5-7.
  1. Wang, Y. Chen, K. A. Gibney, S. Erramilli, P. Mohanty (2008) “Silicon-based nanochannel glucose sensor”, Appl. Phys. Lett. 92, 013903-013905.
  1. Chen, X. Wang, M. K. Hong, P. Mohanty (2008) “Nanoscale enzyme Sensor for urea sensing”, Sensors and Actuators B 133, 593-598
  1. L. R. Chieffo, J. T. Shattuck, E. Pinnick, J. J. Amsden, M. K. Hong, F. Wang, S. Erramilli, L. Ziegler (2008) “Nitrous Oxide Vibrational Energy Relaxation Is a Probe of Interfacial Water in Lipid Bilayers”, J. Phys. Chem B, 112, 12776-12782.
  1. Yanik. X. Wang, M. K. Hong, S. Erramilli, H. Altug(2008) “Extraordinary mid-infrared transmission through coaxial aperture arrays: localized plasmons and surface plasmons” Applied Physics Letters, 93, 81104.
  1. Amsden, J. J., Kralj, J. M., Chieffo, L. R., Wang, X. H., Erramilli, S., Spudich, E. N., Spudich, J. L., Ziegler, L. D., & Rothschild, K. J. (2007) “Sub-picosecond Protein Backbone Changes during the Green-Absorbing Proteorhodopsin Primary Photoreaction” Journal of Physical Chemistry B 111, 11824-11831.
  1. Yu Chen, Xihua Wang, Mi K. Hong, Shyamsunder Erramilli, Pritiraj Mohanty, and Carol Rosenberg, (2007) “Nanoscale field effect transistor for biomolecular signal amplification” Phys. Lett. 91, 243511.
  1. Chieffo, J. Amsden, J. Shattuck, S. Erramilli and L. Ziegler (2007) “Ultrafast vibrational relaxation of liquid H2O following librational combination excitation” Chemical Physics 341, 71-80.
  1. Celli, J. P., Turner, B. S., Afdhal, N. H., Ewoldt, R. H., McKinley, G. H., Bansil, R., & Erramilli, S. (2007) Biomacromolecules 8, 1580-1586

 

  1. Chieffo, J. Amsden, J. Shattuck, M. K. Hong. L. D. Ziegler and S. Erramilli “Femtosecond infrared vibrational lifetime measurements of the anesthetic gas nitrous oxide in membranes.” Biophysical Reviews and Letters, Vol. 1, 309-316 (2006). Web archive at arXiv:0705.0835v1 [physics.bio-ph]
  1. Dorignac, A. Kalinowski, S. Erramilli, P. Mohanty (2006) Dynamical response of nanomechanical oscillators in immiscible viscous fluid for in vitro biomolecular recognition. Physical Review Letters 96:186105.
  1. Chieffo, J. Amsden, J. Shattuck, M. K. Hong. L. Ziegler and S. Erramilli (2006) Femtosecond         infrared vibrational lifetime measurements of the anesthetic gas nitrous oxide in membranes. Biophysical Reviews and Letters, 1, 309-316.
  1. Chen, X. Wang, S. Erramilli, and P. Mohanty (2006). Silicon-based nanoelectronic field-effect pH sensor with local gate control. Applied Physics Letters 89, 223512.

 

  1. Celli, B. Gregor, B. Turner, N. H. Afdhal, R.Bansil, and S. Erramilli (2005)
    Viscoelastic Properties and Dynamics of Porcine Gastric Mucin Biomacromolecules 6, 1329 – 1333.
  1. K Hong, A. Swan and S. Erramilli, Evanescent Wave Vibrational Microscopy, Optics and Photonics News, July 2004, 30-35.

 

  1. Erramilli, M. K. Hong, P. Huie (2000) Breaking the Femtogram Barrier in Near-field Infrared Spectroscopy. Proc.SPIE 3918, 197-201.
  1. M. K. Hong and S. Erramilli (2002) Proposed raman nanospectroscope using entangled photons. Proc. ICSSUR (Int. conf. on Squeezed States and Uncertainty Relations) (http://www.wam.umd.edu/~ys/boston/hong.pdf)
  1. K. Hong, N. Dokholyan, A. Jeung, T. I. Smith, H. A. Schwettman, P. Huie, Shyamsunder Erramilli (1998) Infrared Images in liquid water obtained using a Scanning Near Field Infrared Microscope based on a Free Electron Laser, Nucl. Inst. Methods. Phys. Res. Sect. B 144, 246-255.
  1. A. G. Jeung, P. Huie, S. Erramilli, M. K. Hong and T. I. Smith (1997) Application of Scanning Near Field Infrared Spectroscopy to Biomedical studies, Proc. SPIE 3153, 115-122.
  1. M. K. Hong, A. Jeung, P. Huie and Shyamsunder Erramilli (1996) Development of a Scanning Near Field Infrared Microscope based on a Free Electron Laser, Proc. SPIE 2863, 54-63 (1996).
  1. D. Hajduk, R. Register, L. Fetters, S. M. Gruner, K. Brister, L. J. Fetters Shyamsunder Erramilli “High-Pressure Effects on the Disordered Phase of Block Copolymer Melts” Macromolecules 28:, 7148-7156 (1995).
  1. F. Osterberg, M. Kriechbaum, M. W. Tate, A. Polcyn, V. Skita, P. T. C. So, S. M. Gruner and Shyamsunder Erramilli “Time-Resolved X-ray diffraction studies of Pressure induced structural dynamics in membranes”   Physical Review Letters 72:, 2967-2970 (1994).
  1. D. Rintoul, S. Torquato, I. A. Aksay, S. Erramilli “ Structure and transport properties of a porous magnetic gel via x-ray microtomography”, Phys. Rev. E 54: 2663 (1996).
  1. Erramilli, F. Osterberg, S. M. Gruner, M. W. Tate and M. Kriechbaum “Time-Resolved X-ray diffraction studies of Pressure-jump induced topological transitions in biological membranes” Proc. SPIE 2521: 188-196 (1995).
  1. Shyamsunder Erramilli, F. Osterberg and B. Vogelaar “Undergraduate laboratory: Principles of Gel Electrophoresis”   American Journal of Physics 63:, 639-643 (1995).
  1. R. Perkins, R.B. Dause, X. Li, T.S. Davis, P.L. Ahl, S.R. Minchey, T.F. Taraschi, S. Erramilli, S.M. Gruner and A.S. Janoff, Pressure induced fusion (PIF) liposomes: a solventless sterilizing method for producing large phosholipid vesicles, J. Liposome Res. 5 (1995) (3), pp. 605–626.
  1. Osterberg, M. Kriechbaum, M. W. Tate, A. Polcyn, V. Skita, P. T. C. So, S. M. Gruner and Shyamsunder Erramilli “Time-Resolved X-ray diffraction studies of Pressure induced structural dynamics in membranes”   Physical Review Letters 72:, 2967-2970 (1994).
  1. M. K.Hong, A. G.Jeung and S. Erramilli, “Development of a Scanning Near Field Infrared Microscope based on a Free Electron Laser” First Free Electron Laser Users’ Workshop, Stanford CA (1994).
  1. Yong-Nam Jun, Daniel Dabbs, Ilhan A. Aksay and Shyamsunder Erramilli “Processing of monolithic magnetic gels for magnetophoresis” Langmuir 10:, 3377-3379 (1994).
  1. Dickstein, S. Erramilli, R. E. Goldstein, D. Jackson and S. Langer “Labyrinthine Pattern Formation of Magnetic Fluids”, Science 261, 1021-1015 (1993).
  1. P. T. C. So, S. M. Gruner and Shyamsunder Erramilli “Pressure Induced Topological Transitions in Membranes.” Phys. Rev. Lett 72 3455-3458 (1993)
  1. R. H. Austin and Shyamsunder Erramilli. “Low temperature spectroscopy” Methods in Enzymology 246:, 131-168 (1994).
  1. T. Gleeson, S. M. Gruner and Shyamsunder Erramilli “Freezing and melting of water in membranes”, Biophysical Journal 67: 706-712 (1994).
  1. H. Ahn, M. G. Allen, W. S. N. Trimmer, Y. Jun and Shyamsunder Erramilli “A Fully Integrated Micromachined Magnetic Particle Manipulator and Separator” IEEE Journal of Microelectromechanical Systems
  1. K. Hong, O. Narayan, E. Shyamsunder, R. E. Goldstein, D. S. Fisher, M. Hogan and R. H. Austin “Internal Dynamics of DNA Probed by Transient Electric Birefringence” Phys. Rev. Lett. 68, 1430-1433 (1992)
  1. T. C. So, S. M. Gruner and E. Shyamsunder. “Automated Pressure and Temperature Control System for x-ray diffraction studies” (1992). Rev. Sci. Instr. 63: 1763-1770.

 

  1. T. C. So, S. M. Gruner and E. Shyamsunder. “High-Pressure Dilatometer” (1992). Rev. Sci. Instr. 63: 5426-5431.

 

  1. A. Barry, H. Lamparski, Erramilli Shyamsunder, F. Osterberrg, J. Cerne, M. F. Brown and D. F. O’Brien (1992) “31P NMR and X-ray diffraction study of the effect of Photopolymerization on Lipid Polymoprhism” Biochemistry 31: 10114-10120.

 

  1. W. Tate, Erramilli Shyamsunder, Sol M. Gruner and K. L. D’Amico (1992). “Kinetics of the Lamellar-Inverse Hexagonal Phase Transition Determined by Time-Resolved X-ray Diffraction” Biochemistry 31: 1081-1092.

 

  1. K. Hong, E. Shyamsunder, R. H. Austin, B. S. Gerstman and S. S. Chan (1991). “Time-resolved infrared studies of molecular diffusion in myoglobin” Phys. Rev. Lett. 66: 2673-2676.

 

  1. W. Tate, E.F. Eikenberry, D.C. Turner, E. Shyamsunder and S.M. Gruner (1991). “Nonbilayer phases of membrane lipids” Chem.Phys. Lipids 57: 147-164.

 

  1. Narayan, P.T.C. So, D.C. Turner, S.M. Gruner, M.W. Tate and E. Shyamsunder (1990). “Volume constriction in a lipid-water liquid crystal using high-pressure x-ray diffraction”   Phys. Rev. A 42: 7479-7482.

 

  1. M. Gruner and E. Shyamsunder (1991). “Is the mechanism of general anesthesia related to lipid membrane spontaneous curvature?” Annals N.Y. Acad. Sci. 625: 685-697.

 

  1. J. Janoff, L.T. Boni, M.C. Popescu, S.R. Minchey, P.R. Cullis, T.D. Madden, T. Taraschi, S.M. Gruner, E. Shyamsunder, M.W. Tate, R. Mendelsohn and D. Bonner (1988). “Unusual lipid structures selectively reduce the toxicity of amphotericin B”. Proc. Nat. Acad. Sci. USA 85 L 6122-6126.

 

  1. Shyamsunder, P. Botos and S.M. Gruner (1988). “X-ray diffraction study of the effects of pressure on bilayer to non-bilayer lipid membrane phase transitions.” J. Chem. Phys. 90: 1293-1295.

 

  1. Careri, E. Gratton and E. Shyamsunder (1988). “Fine structure of the amide 1 band in acetanilide.” Phys. Rev. A 37: 4048.

 

  1. Shyamsunder, S.M. Gruner, M.W. Tate, D.C. Turner, P.T.C. So and C.P.S. Tilcock (1988). “Observation of inverted cubic phase in hydrated dioleoylphosphatidylethanolamine membranes.” Biochem. 27: 2332.

 

  1. Doster, S.F. Bowne, H. Frauenfelder, L. Reinisch and E. Shyamsunder (1987). “Recombination of carbon-monoxide to ferrous horse-radish peroxidase types A and C.” {\it J. Mol. Biol. 194: 299-312.

 

  1. Ansari, E.E. Di Iorio, D.D. Diott, H. Frauenfelder, I.E.T. Iben, P. Langer, H. Roder, T. Sauke and E. Shyamsunder (1986). “Ligand binding to heme proteins: the relevance of low-temperature data.”   Biochem. 25: 3139.

 

  1. C. Scott, G. Careri, E. Gratton and E. Shyamsunder (1985). “IR overtone spectrum of the vibrational soliton in crystalline acetanilide.” Phys. Rev. B 32: 5551.

 

  1. Ansari, J. Berendzen, S.F. Bowne, H. Frauenfelder, I.E.T. Iben, T.B. Sauke, E. Shyamsunder and R.D. Young (1985). “Protein states and proteinquakes.”   Proc. Nat. Acad. Sci. USA 82: 5000.

 

  1. Stetzkowski, R. Banerjee, M.C. Marden, D.K. Beece, S.F. Bowne, W. Doster, L. Eisenstein, H. Frauenfelder, C. Jung, L. Reinisch and E. Shyamsunder (1985). “Dynamics of dioxygen and carbon monoxide binding to soybean leghemoglobin.” J. Biol. Chem. 260: 8803.

 

  1. Careri, U. Vuonotempo, F. Galuzzi, A. C. Scott, E. Gratton and E. Shyamsunder “Spectroscopic for a Davydov-like soliton in acetanilide” Phys. Rev. B 30: 4689 (1984).

 

  1. Roder, J. Berendzen, S.F. Bowne, H. Frauenfelder, T.B. Sauke, E. Shyamsunder and M.B. Weissman (1984). “Comparison of the magnetic properties of deoxy and photodissociated myoglobin.” Proc. Natl. Acad. Sci. USA 81: 2359.